FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005797355

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797355
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73591528
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA114750.011.88821
ATCGGAA133050.010.2806232
TCGTATG79450.08.69846544-45
CGTATGC83400.08.3718246-47
TATGCCG84000.08.31248-49
CTCGTAT85000.08.15844644-45
TCCGATC71050.06.4172416
TCGGAAG233250.06.16967443
AATCTCG117900.06.06337240-41
TCTCGTA122100.05.87416342-43
TTCCGAT95100.05.2438475
CGGAAGA309150.05.1004684
ATGCCGT162150.05.008949348-49
Produced by FastQC (version 0.11.5)