FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797363

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797363
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78404710
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA130650.011.0650841
ATCGGAA153600.09.7106352
TCGTATG85050.09.13079244-45
CTCGTAT89150.08.39120344-45
TATGCCG89900.08.29477948-49
CGTATGC93850.08.17340746-47
AATCTCG129050.06.330575540-41
TCGGAAG257400.06.2741863
TCTCGTA126500.06.082639742-43
TCCGATC80700.05.76797256
CGGAAGA322350.05.2161214
AGTCACG176650.05.02796228-29
Produced by FastQC (version 0.11.5)