FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005797367

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797367
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73830939
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGTAT83450.07.171517444-45
GCGAAAT75950.07.160854336-37
TATGCCG83500.06.91124148-49
CGTATGC84550.06.881591346-47
TCGTATG82350.06.83473344-45
GTGCGAA86950.06.801182334-35
GATCGGA165000.06.5132161
TGCGAAA94900.06.08131136-37
ATCGGAA182100.06.0257192
TCCGATC77300.05.96027666
CGAAATC112650.05.397149638-39
AATCTCG120700.05.03707840-41
Produced by FastQC (version 0.11.5)