FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797368

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797368
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73830939
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA56750.07.030933458-59
GCCGTAT66500.06.571518458-59
CGTATCA69450.06.18983860-61
GATCGGA169400.05.8597641
ATCGGAA180500.05.81528332
CCGTATC85650.05.240918660-61
Produced by FastQC (version 0.11.5)