FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797389

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797389
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73629684
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTACTC267600.013.5214521
TTACTCG70300.010.8804332
GATCGGA127200.07.8123911
ATCGGAA148200.07.30907342
TCGTATG80450.06.81921644-45
CGTATGC83250.06.561268346-47
CTCGTAT82650.06.522761344-45
TATGCCG83050.06.462685648-49
TACTCGA77850.06.22413733
ATTACTA271300.05.66079571
TCCGATC75550.05.59559876
Produced by FastQC (version 0.11.5)