FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797393

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797393
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77399995
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA130650.09.3139931
ATCGGAA149200.08.3729392
TCGTATG81250.08.0673444-45
TATGCCG85050.07.595062348-49
CTCGTAT86850.07.27371744-45
CGTATGC88700.07.121920646-47
TCCGATC78750.05.91091546
TCTCGTA128400.05.28993142-43
TCGGAAG253400.05.28594453
Produced by FastQC (version 0.11.5)