FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797394

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797394
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77399995
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA134800.08.0348581
ATCGGAA154150.07.3653912
CGCCGTA57250.07.342694358-59
CGTATCA71700.06.1609160-61
GCCGTAT71750.06.09050958-59
GAGCGTC204400.05.15946969
TCGGAAG262150.05.073943
AGAGCGT201400.05.04769238
Produced by FastQC (version 0.11.5)