FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797406

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797406
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75952946
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA123200.08.6009751
CGCCGTA58150.07.63722858-59
ATCGGAA143750.07.53594732
GCCGTAT70350.06.616615358-59
CGAGTAA78800.06.41962632-33
CGTATCA74150.06.1814760-61
TCGAGTA87600.05.964511432-33
GTCGAGT87150.05.91346630-31
CCGTATC86450.05.60416360-61
AGAGCGT197450.05.3410858
GAGCGTC202650.05.25086749
GCGTCGT97850.05.0732310-11
AGCGTCG112450.05.00596710-11
Produced by FastQC (version 0.11.5)