FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005797407

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797407
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73710330
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA118800.011.3274891
ATCGGAA138100.010.215672
CGTATGC85750.08.80705246-47
TCGTATG81850.08.73344944-45
TATGCCG86400.08.38346148-49
CTCGTAT88100.08.24866244-45
TCGGAAG240800.06.25299363
AATCTCG121350.05.969068540-41
TCTCGTA126550.05.648646442-43
TCCGATC72350.05.4489526
CGGAAGA306850.05.24745274
Produced by FastQC (version 0.11.5)