FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797417

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797417
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89689931
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA143700.08.9642181
ATCGGAA168400.07.75675772
TCGTATG90500.07.321482744-45
CGTATGC97200.07.280953446-47
TATGCCG96500.07.186072348-49
CTCGTAT94600.07.079480644-45
TCCGATC87550.06.6188926
CGAAGTA127750.05.80070734-35
TTCCGAT118450.05.17292645
AATCTCG141950.05.11973640-41
CCGATCT128000.05.0095137
Produced by FastQC (version 0.11.5)