FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797419

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797419
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80481813
Sequences flagged as poor quality0
Sequence length101
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA206450.05.856060594-95
ATCGGAA214650.05.17866394-95
AGATCGG258800.05.056965494-95
Produced by FastQC (version 0.11.5)