FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797429

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797429
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences76708197
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA124650.011.4429691
ATCGGAA147150.010.039942
TCGTATG83900.08.91645944-45
TATGCCG85550.08.85540448-49
CTCGTAT86650.08.63347844-45
CGTATGC91300.08.34976846-47
TCGGAAG248300.06.25604773
AATCTCG126150.06.23152540-41
TCTCGTA128600.06.16813942-43
TCCGATC74750.06.03614856
CGGAAGA324000.05.21952064
Produced by FastQC (version 0.11.5)