FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797437

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797437
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80863932
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA123300.010.2929021
ATCGGAA148100.08.4683142
TCGTATG87250.08.11151244-45
CGTATGC92100.07.555332746-47
TATGCCG89400.07.27878148-49
CTCGTAT88900.07.23966644-45
TCCGATC80100.06.40436366
AATCTCG126200.05.739822440-41
TCGGAAG249300.05.62067563
TCTCGTA128550.05.376234542-43
TTCCGAT106950.05.0186015
Produced by FastQC (version 0.11.5)