FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797438

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797438
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80863932
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA132100.08.4863141
CGCCGTA62600.07.85345758-59
ATCGGAA147200.07.8095122
GCCGTAT72300.07.062606358-59
CGTATCA79150.06.8115160-61
AGAGCGT206750.05.46744358
GCGTCGT100200.05.380207510-11
GAGCGTC213700.05.37854159
CCGTATC99400.05.232704660-61
AATTCGT103400.05.122184336-37
Produced by FastQC (version 0.11.5)