Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005797439 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 86786690 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GATCGGA | 13995 | 0.0 | 8.831152 | 1 |
ATCGGAA | 16515 | 0.0 | 7.5355325 | 2 |
TCGTATG | 9205 | 0.0 | 7.353031 | 44-45 |
TATGCCG | 9280 | 0.0 | 7.114335 | 48-49 |
CTCGTAT | 9315 | 0.0 | 7.062237 | 44-45 |
CGTATGC | 9915 | 0.0 | 6.658738 | 46-47 |
TCCGATC | 8840 | 0.0 | 5.319409 | 6 |
TCGGAAG | 26565 | 0.0 | 5.221019 | 3 |