FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797440

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797440
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86786690
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA144350.07.3057661
CGCCGTA61050.07.041276558-59
ATCGGAA165250.06.35313222
GCCGTAT79000.06.16290258-59
AGAGCGT215900.05.1267178
GAGCGTC228400.05.0748869
CGTATCA84300.05.04286660-61
Produced by FastQC (version 0.11.5)