FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797446

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797446
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73332938
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA130900.013.35351
ATCGGAA146700.012.8217582
CGCCGTA62450.011.94203158-59
GCCGTAT73900.09.931046558-59
CGTATCA74400.09.92814960-61
CGGTGTA101450.08.66179438-39
AGAGCGT198850.08.5983838
GCGTCGT96200.08.343616510-11
GAGCGTC204950.08.2728619
CCGTATC93400.08.11193860-61
AAGAGCG230050.07.7625157
TCGGAAG251400.07.5952193
TAGTGAC255800.07.39042661
TCGTGTA109350.07.29746514-15
CGTCGTG115000.07.248317212-13
AGCGTCG119050.07.200961610-11
TCGCCGT110950.07.064439356-57
GTCGTGT128250.06.480948412-13
TCCGATC79100.06.365273534-35
CGGAAGA326800.06.2497554
Produced by FastQC (version 0.11.5)