FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797455

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797455
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73883123
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA122800.012.0770131
ATCGGAA144050.010.45299152
TCGTATG81200.09.50541444-45
CTCGTAT84950.09.2535544-45
TATGCCG85500.09.22166948-49
CGTATGC87900.08.83484246-47
TCGGAAG240850.06.8433153
TCTCGTA121550.06.36957142-43
TCCGATC74250.05.5015396
CGGAAGA312150.05.4475594
ATCTCGT154750.05.09512642-43
CGTCTGA163500.05.054752316-17
Produced by FastQC (version 0.11.5)