FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797456

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797456
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73883123
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA131400.09.1103561
CGCCGTA55700.08.22923958-59
ATCGGAA151550.08.0872312
GCCGTAT72500.07.1412858-59
CGTATCA73500.06.688587760-61
AGAGCGT193350.06.4863098
GAGCGTC199750.06.1119219
GCGTCGT94500.06.10763710-11
CCGTATC90150.05.980142660-61
AAGAGCG226150.05.4615047
AGCGTCG113950.05.39863810-11
TCGTGTA109300.05.367121714-15
TCGGAAG260250.05.36650473
TCGCCGT99500.05.29900256-57
CGTCGTG116750.05.187467612-13
Produced by FastQC (version 0.11.5)