FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005797465

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797465
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64807080
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA115050.010.1216161
ATCGGAA129250.09.2233312
TCGTATG75350.08.44677544-45
CGTATGC77400.08.10027646-47
TATGCCG78100.07.753992648-49
CTCGTAT78300.07.67358244-45
AATCTCG110850.05.9561440-41
TCGGAAG216600.05.8545893
TCTCGTA109100.05.57266442-43
TCCGATC62550.05.5429276
Produced by FastQC (version 0.11.5)