Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005797467 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 71816569 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GATCGGA | 10890 | 0.0 | 12.351788 | 1 |
ATCGGAA | 13165 | 0.0 | 10.282868 | 2 |
TCGTATG | 7830 | 0.0 | 9.159883 | 44-45 |
CTCGTAT | 7995 | 0.0 | 8.792613 | 44-45 |
CGTATGC | 8235 | 0.0 | 8.738177 | 46-47 |
TATGCCG | 8220 | 0.0 | 8.667392 | 48-49 |
TCGGAAG | 22820 | 0.0 | 6.6190233 | 3 |
AATCTCG | 11555 | 0.0 | 6.5360656 | 40-41 |
CGGCAGA | 30100 | 0.0 | 6.1268396 | 1 |
TCTCGTA | 11660 | 0.0 | 6.028946 | 42-43 |
TCCGATC | 6820 | 0.0 | 5.571681 | 6 |
CGGAAGA | 30005 | 0.0 | 5.2398033 | 4 |