FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005797476

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797476
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30394723
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCAGTCG80450.09.6851462
CAGTCGG85500.08.6129353
AGTCGGT47800.07.05696874
CAATCGG26050.06.56568963
CCAATCG29550.06.4311842
TCCGATC32750.05.87360334-35
CGATCTA18303.6379788E-125.06104836-37
Produced by FastQC (version 0.11.5)