FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005797486

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797486
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71792107
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA117300.010.9725051
ATCGGAA136000.09.6735722
CGCCGTA56850.09.52524158-59
GCCGTAT66300.07.988457758-59
CGTATCA72350.07.61595360-61
AGAGCGT180600.07.09966338
GAGCGTC187300.06.69350629
GCGTCGT91950.06.48183310-11
CCGTATC87000.06.360795560-61
AAGAGCG216100.06.30674467
TCGGAAG235450.05.930623
AGCGTCG103350.05.92768510-11
TCGCCGT100850.05.67581956-57
TCGTGTA103900.05.623102714-15
CGTCGTG110600.05.324786712-13
Produced by FastQC (version 0.11.5)