FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797496

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797496
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80362034
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA186800.06.55299894-95
AGATCGG242800.06.43170994-95
ATCGGAA196150.06.313338894-95
TAGATCG79200.05.76216594-95
TTGACTC397350.05.6938241
TCCGATC81350.05.25494934-35
Produced by FastQC (version 0.11.5)