FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005797508

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797508
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67393041
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA116200.08.2579341
CGCCGTA51000.07.87002258-59
ATCGGAA132250.07.4354612
GCCGTAT61250.06.74687458-59
CGTATCA65300.06.219238360-61
CCGTATC77300.05.40738760-61
GCGTCGT84300.05.325110410-11
AGAGCGT176250.05.30968438
CGGTGTA88000.05.2899238-39
GAGCGTC184000.05.26669459
AAGAGCG206050.05.18727167
TCGGAAG228700.05.08898543
Produced by FastQC (version 0.11.5)