FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797540

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797540
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78456877
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTATGC87300.021.4385911
TATGCCG80100.015.7145783
GTATGCC220200.08.3695822
ATGCCGT177050.06.22416934
GATCGGA166900.05.739700394-95
ATCGGAA183600.05.450670294-95
Produced by FastQC (version 0.11.5)