FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797543

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797543
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79219319
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA125200.013.2883631
ATCGGAA144050.011.740942
TCGTATG85150.09.92925844-45
CGTATGC89050.09.76097346-47
CTCGTAT85550.09.57746444-45
TATGCCG88700.09.55851848-49
TCGGAAG256950.07.0061413
AATCTCG134700.06.71760540-41
TCTCGTA127900.06.57339442-43
CGGAAGA331000.05.66831354
ATCTCGT168650.05.534305642-43
CGTCTGA173000.05.35382916-17
AGTCACG181250.05.188812328-29
ATGCCGT182350.05.144430648-49
Produced by FastQC (version 0.11.5)