FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797544

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797544
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79219319
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA122550.012.5975511
CGCCGTA61500.011.04471458-59
ATCGGAA145400.010.650552
GCCGTAT78850.08.94578258-59
CGTATCA81900.08.78671360-61
AGAGCGT202100.07.75535448
CCGTATC95850.07.40878160-61
GCGTCGT97750.07.38582210-11
AATTCGT108200.07.08993736-37
GAGCGTC219700.07.06927739
AAGAGCG236950.06.95535567
AGCGTCG118800.06.57690310-11
TCGCCGT111400.06.52384156-57
GAATTCG119350.06.427436434-35
ATTCGTG121700.06.34249236-37
CGTCGTG118700.06.302541712-13
TCGGAAG266550.06.2196253
TCGTGTA131700.05.98725638-39
GTCGCCG138050.05.660132456-57
GTCGTGT134750.05.63997412-13
Produced by FastQC (version 0.11.5)