FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797555

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797555
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79964239
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA134600.010.9884611
ATCGGAA155700.09.7053092
TCGTATG89900.08.50633644-45
TATGCCG91350.08.47516248-49
CTCGTAT92050.08.28185644-45
CGTATGC95700.08.06510846-47
TCGGAAG254600.06.4944253
TCTCGTA132850.06.0244742-43
TCCGATC79750.05.95587736
CGACACA158300.05.19106334-35
CGGAAGA330350.05.09145554
Produced by FastQC (version 0.11.5)