FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797567

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797567
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77406813
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA120800.07.869171
ATCGGAA139100.06.6580842
TCGTATG78650.06.190110744-45
CTCGTAT81550.05.88261944-45
TATGCCG82200.05.864917848-49
TCCGATC77800.05.8604676
CGTATGC82500.05.699746-47
Produced by FastQC (version 0.11.5)