Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005797573 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 79017183 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GATCGGA | 12980 | 0.0 | 10.2218685 | 1 |
ATCGGAA | 14840 | 0.0 | 8.932157 | 2 |
CTCGTAT | 8530 | 0.0 | 8.2967205 | 44-45 |
TCGTATG | 8295 | 0.0 | 8.159578 | 44-45 |
TATGCCG | 8470 | 0.0 | 7.9067454 | 48-49 |
CGTATGC | 8935 | 0.0 | 7.7079434 | 46-47 |
TCTCGTA | 12515 | 0.0 | 5.863721 | 42-43 |
TCGGAAG | 24885 | 0.0 | 5.7848024 | 3 |
TCCGATC | 7885 | 0.0 | 5.601857 | 6 |