FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005797583

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797583
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72897290
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA120600.09.1441811
TCGTATG76700.07.83377444-45
ATCGGAA146950.07.75766562
TATGCCG82300.07.214048448-49
CGTATGC83450.07.08621146-47
CTCGTAT83250.07.017730744-45
TCCGATC69550.06.89767846
TTCCGAT91250.05.7258315
AATCTCG113650.05.53780740-41
TCGGAAG232950.05.4033463
TCTCGTA120000.05.38316742-43
Produced by FastQC (version 0.11.5)