FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797584

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797584
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72897290
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA123700.07.8726431
ATCGGAA144750.07.41707232
CGCCGTA54650.07.25748458-59
GCCGTAT64850.06.70194658-59
CGTATCA69600.06.00559760-61
AGAGCGT184600.05.3526628
GAGCGTC193450.05.10769949
CCGTATC87900.05.052490760-61
Produced by FastQC (version 0.11.5)