FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005797585

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797585
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66768486
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA123650.05.88161471
CGTATGC68500.05.82454546-47
TCGTATG66250.05.807364544-45
TCCGATC65400.05.59232956
CTCGTAT70450.05.427437344-45
TATGCCG71650.05.402747648-49
ATCGGAA141950.05.02008152
Produced by FastQC (version 0.11.5)