FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005797586

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797586
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66768486
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA48150.06.362869758-59
GCCGTAT57550.05.529923458-59
GATCGGA128200.05.29866361
CGTATCA61150.05.12678760-61
Produced by FastQC (version 0.11.5)