FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797588

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797588
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences83420859
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC98350.08.6691134-35
CCAATGT458300.07.87801032
CGATCTA56250.07.388338636-37
GATCGGA179450.07.04681894-95
TAGATCG80450.07.002403794-95
TTCCGAT122450.06.943503434-35
TCAGACG174450.06.72465220-21
AGATCGG226150.06.548115794-95
CAATGTG574050.06.3805743
GCCAATG531200.06.28109071
CCGATCT133900.06.18979336-37
ATCGGAA190750.05.86923194-95
Produced by FastQC (version 0.11.5)