FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005797591

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797591
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65263637
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTACTC257000.016.3295691
TTACTCG64250.016.265512
GATCGGA108500.010.8634821
ATCGGAA124900.010.04062
TCGTATG67750.09.28938544-45
CTCGTAT72450.09.01456344-45
TATGCCG71600.08.78976248-49
CGTATGC74850.08.53502746-47
TACTCGA65350.08.5039323
TCGGAAG207100.06.69703053
AATCTCG103900.06.537439340-41
TCTCGTA104500.06.295356342-43
ATTACTA256550.05.4650881
CGGAAGA272500.05.45574864
ATCTCGT136450.05.291233542-43
ATTACAC237700.05.17866371
ATGCCGT148150.05.065585648-49
Produced by FastQC (version 0.11.5)