FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797597

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797597
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences76162809
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA122100.08.1007151
ATCGGAA142200.06.9481152
TCGTATG78750.06.72498144-45
CGTATGC83050.06.348188446-47
CTCGTAT80300.06.12197544-45
TATGCCG86350.05.91306448-49
TCCGATC73800.05.47061546
AATCTCG114800.05.19251540-41