FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797598

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797598
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences76162809
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA52050.07.300781258-59
GATCGGA126200.06.88696861
GCCGTAT65000.06.28470958-59
ATCGGAA145350.05.9797182
CGTATCA73800.05.664095460-61
Produced by FastQC (version 0.11.5)