FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797599

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797599
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75420014
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA141550.06.9839351
ATCGGAA154700.06.6320192
TCGTATG80650.06.596123744-45
CGGCAGA317800.06.3410141
CGTATGC87000.06.33297846-47
CTCGTAT83600.06.022470544-45
TATGCCG86350.05.968065348-49
Produced by FastQC (version 0.11.5)