FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005797609

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797609
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65434459
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA93550.08.0272681
ATCGGAA114750.06.9540522
CGCTCGA60700.06.691159734-35
CGTATGC67250.06.179926446-47
TCGTATG67200.05.97252544-45
TATGCCG67200.05.86643948-49
CTCGTAT67250.05.61494344-45
CGGCAGA256700.05.6101091
TCCGATC65700.05.34981066
ACGCTCG75450.05.288640534-35
TCGAATC77400.05.124651438-39
Produced by FastQC (version 0.11.5)