FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797611

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797611
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72593273
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA140000.08.2297481
TCGTATG70950.08.20070944-45
CTCGTAT75850.07.733553444-45
TATGCCG75500.07.706526848-49
CGTATGC77550.07.68654246-47
ATCGGAA156050.07.61466842
CGCTCGA84150.07.309412534-35
ACGCTCG85500.06.999568534-35
TCGAATC92750.06.14517438-39
CGAATCT106250.05.252617438-39
TCGGAAG245000.05.06318433
TCTCGTA113300.05.05154242-43
Produced by FastQC (version 0.11.5)