FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797612

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797612
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72593273
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGAGCG69550.08.2640041
GATCGGA139100.07.7176231
ATCGGAA153450.06.9008362
AGAGCGT202000.05.3355188
CGGTGTA96200.05.281076438-39
GAGCGTC211800.05.0886969
Produced by FastQC (version 0.11.5)