FastQCFastQC Report
Thu 21 Jul 2022
EGAF00005797713

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797713
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47180375
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG742720.1574213854807216No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT567110.12020040112016912No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG551730.11694057115908892No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)