FastQCFastQC Report
Sun 24 Jul 2022
EGAF00005797748

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797748
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50130532
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGGTATATCTCGTAT1358810.2710543746074747TruSeq Adapter, Index 12 (97% over 37bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGGTATATCGCGTAT773780.15435303978022816TruSeq Adapter, Index 12 (97% over 37bp)

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)