FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005798546

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005798546
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences366673247
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATGAAA1144350.018.6947961
GGGAATG1684600.018.4947091
ACGAGGA1381550.018.3065721
GACCAAT1432550.018.1267851
AAACAAC1246600.018.0547859
TGACGGC1567750.018.0278551
CCTACCA2357800.018.0172311
ATAACGC1523200.017.971491
TACGGAT1390750.017.889441
AGAAAGG1095100.017.86368810
CTCGAAA770750.017.7463571
ACCGAAA795850.017.7397259
ACACTGA1568950.017.6815551
GACTAAC795550.017.6421571
AGATAAT1069200.017.6392299
GAAATGA982100.017.6128251
CCGGTAG1119650.017.5922261
TAAACCG1416450.017.5734061
AGGGTGA2416200.017.5128421
ATGCGAT1041650.017.5078051
Produced by FastQC (version 0.11.5)