FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005798558

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005798558
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences358574979
Sequences flagged as poor quality0
Sequence length8-26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AATAAGA850700.018.3755442
GACCGGA1521850.018.2179189
GAAATGA1230200.018.2166561
CAATGGA2210100.018.0076038
GATGAAA1015950.017.9466761
ATGCGAT1221050.017.8105721
GCCTCTA2619150.017.7643831
CTCGGGA1408700.017.68981
GACTAAC1084850.017.6813951
CATCGAA1319750.017.6619421
TGCCAAA1611400.017.6604581
CCGTGGA1064150.017.6000391
CCCTCCT3527450.017.599031
GGAAAGC929800.017.5805031
GAATAAG1337950.017.5741651
ACCCACT1989400.017.5355831
AGACCGG1586250.017.4943798
CACCGAA676900.017.2672988
TGACGGC1190200.017.2471161
GAACGGA1963200.017.2409461
Produced by FastQC (version 0.11.5)