EGAF00005800614 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005800614
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20685452
Sequences flagged as poor quality	0
Sequence length	65
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCTCGGTAATCTCGTATGCCGTCTTCTGCTTG	314896	1.5223065949924615	TruSeq Adapter, Index 9 (97% over 37bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	34475	58.041927	1
ACGCTCG	34520	57.46989	32
ATCGGAA	35130	57.153885	2
TATGCCG	34740	57.081512	48
CGCTCGG	34750	56.97067	33
CTCGTAT	34925	56.796043	44
TCTCGTA	34965	56.722633	43
CGTATGC	35005	56.640965	46
CTCGGTA	35050	56.575626	35
GCTCGGT	35045	56.558445	34
TCGGAAG	35445	56.537724	3
CGGTAAT	35010	56.50855	37
GTCACGC	35255	56.504265	29
TCGGTAA	35060	56.50018	36
ATCTCGT	35200	56.327183	42
ACACGTC	35660	56.2044	13
TCGTATG	35525	56.135685	45
CGTCTGA	35535	56.128456	16
ATGCCGT	35365	56.0894	49
TGCCGTC	35385	56.057693	50