EGAF00005800703 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005800703
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	39881599
Sequences flagged as poor quality	0
Sequence length	65
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACGCTCGAATCTCGTATGCCGTCTTCTGCTTG	69010	0.17303719442141727	TruSeq Adapter, Index 15 (97% over 36bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACGCTCG	8105	53.935455	34
CGCTCGA	8140	53.63107	35
TATGCCG	8630	50.685715	48
GATCGGA	8815	49.918808	1
CTCGTAT	9060	48.345455	44
CGTATGC	9090	48.283005	46
TCTCGTA	9210	47.33389	43
GCTCGAA	9310	46.98588	36
CGAATCT	9330	46.82017	39
ATGCCGT	9400	46.533802	49
TGCCGTC	9505	45.895622	50
GCCGTCT	9590	45.396564	51
TCGTATG	9700	45.33787	45
ATCGGAA	9755	45.27299	2
TCGGAAG	10155	43.391125	3
ACACGTC	10210	43.10225	13
CGTCTGA	10230	42.931324	16
ATCTCGT	10170	42.8948	42
ACACGCT	10305	42.707787	32
CACGCTC	10320	42.50211	33