EGAF00005800705 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005800705
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22608474
Sequences flagged as poor quality	0
Sequence length	65
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACCACTGTATCTCGTATGCCGTCTTCTGCTTG	336609	1.4888620965749393	TruSeq Adapter, Index 1 (97% over 38bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	37820	57.36558	1
TATGCCG	38095	56.98086	48
CGTATGC	38135	56.884365	46
CTCGTAT	37900	56.85583	44
ATCGGAA	38390	56.840317	2
TCTCGTA	37980	56.713146	43
TATCTCG	37925	56.686752	41
TCGTATG	38405	56.53821	45
CGTCTGA	38545	56.485046	16
TCGGAAG	38715	56.237015	3
ATCTCGT	38345	56.234848	42
ATGCCGT	38620	56.20639	49
ACACGTC	38905	56.19741	13
TGCCGTC	38635	56.176933	50
GCCGTCT	38660	56.132977	51
ACGTCTG	39175	55.60679	15
CGGAAGA	39190	55.495182	4
CCGTCTT	39275	55.284046	52
CGTCTTC	39280	55.201897	53
CACGTCT	39700	55.072044	14